One capabilities.yaml wires skills, tools, rules, sub-agents, MCP servers, and plugins into Cursor, Claude Code, Codex, Windsurf, GitHub Copilot, and 30+ other AI coding agents

Convert documentation websites, GitHub repositories, and PDFs into Claude AI skills with automatic conflict detection

Enables AI agents to prepare, launch, monitor, inspect, and recover existing Nextflow workflows through MCP tools, while client-side expert skills guide pipeline-specific input selection, parameters, QC, and troubleshooting.